miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|58329032|gb|AJ765367.1|AJ765367 GCCCCAATGAAAAAAGGTCAACCCTCGGCCCATGAGGCCATTGTGGGCACATGGAAACCCACCAAGAATGACACATTGGC
CAACCGGTTTCCAGGGTTCGGCACCACCATGAATATCCTTTATGGTGAACGCGTGTGCGGTCAAGGTGACGTGGATGACA
TGAACACAATTGTCACTCATTATTTATATTATCTTGACTTGATGGGTGTGGGCCGTGAGGAAGCTGGGCCCCACGAGGTG
CTGACGTGTGCAGAACAAAAACCGTTCAATCCGTCGGCTCCGACCCAAGCGTCTTCAAGGTAAGCGTGTTTGTTTATCGT
TCTTGATTCTCTCCATGAATAAATGGTGGTTGCGTGGAAATATGTAAGTTTGTGGAATCGTCTGTTAATAGATTTGAAAT
TTGATTCGTTGTTAAAGCGTGTTGTATTTAGTTTGTGAATTTTGCGATATCGAAGTTATATATGAGTATATATTGTTTGA
AGTGAAAAAAAAAAAAAAAAAAAA




Most similar to sp|Q9MA41|CTL1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9MA41|CTL1_ARATH Chitinase-like protein 1 OS=Arabidopsis
           thaliana GN=CTL1 PE=1 SV=1
          Length = 321

 Score =  152 bits (383), Expect = 1e-36
 Identities = 65/98 (66%), Positives = 81/98 (82%)
 Frame = +1

Query: 4   PMKKGQPSAHEAIVGTWKPTKNDTLANRFPGFGTTMNILYGERVCGQGDVDDMNTIVTHY 183
           P+K+ QPSAH+  VG WKPTKNDTL+ R P FG+TMN+LYGE  CGQG +D MN I++HY
Sbjct: 223 PIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHY 282

Query: 184 LYYLDLMGVGREEAGPHEVLTCAEQKPFNPSAPTQASS 297
           LY+LDLMG+GRE+AGP++ L+CAEQKPFNPS    +SS
Sbjct: 283 LYFLDLMGIGREDAGPNDELSCAEQKPFNPSTVPSSSS 320